Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015913999.1_cds_XP_016464014.1_57086
CDS Infomation

[gene=LOC107787011] [db_xref=GeneID:107787011] [protein=vicilin-like antimicrobial peptides 2-2] [protein_id=XP_016464014.1] [location=join(22034..22523,22806..22981,23085..23168,23259..23525,23613..23928,24224..24393)] [gbkey=CDS]
Sequence

ATGATGGTGAAAGTAAGACCTTTCCTTTTTTGTTTGCTATTGCTTGCGGTTGCATCCTTA
TCTTTGGGTACAAAAGACCCAGAGCTAAAACGATGCAAGCACCAGTGCAAAGCCCTACAG
CAAATTGGGGAGCATCAAAGGAAAGAATGTTACGAAATGTGCGAGAAATACGACAGTGAG
AAACAATCGAAAGAAGAAGACACTTCAACTTTTTTCCCCTATAGAGGCAAAGAGGAAACA
GGGGAAGAAGAAGAAGGACAGCAATATGGGGAACAAGAGAGGGAAAATCCTTATGTCTTT
GAGGATCAGCACTTTATTACTGGAATCAAAACCCAACATGGCAGAATTCGTGTTCTTCCC
AAGTTCACAGAGAGGTCTAAGCTACTTAAGGGCATCGAGAATTATCGAGTTGCAATTCTT
GAAGCCAATCCACAGACCTTCATTGTGCCTAACCATTGGGACGCTGATGCTGTCCTCTTT
GTTGCTCAAGGGAGGGGAACGCTGAACTTGGTGCGTAGGGGGAAGAGGAACAGCTTCAAT
ATTCGGCCTGGAGATGTGATCAGAGTACATGCTGGGACTACTGCTTACTTGATCAACAGA
GAAAATAATGAAAAACTTGTCATAGCCAAGCTTCTCAATCCGGTTTCCACCCCTGGCCAG
TTTGAGCACTTTTTTGGGCCAGGAGGGCGAGAGAACCCGGAGTCTTTTTACAACGCCTTC
AGCTCTGAAATTCTTGAATCTGCACTCAACGTTAGGAGGGATAGACTGCAGAGACTCTTC
GGGCAGCAGAGGGAAGGAGTCATTATAAGAGCTTCAGAAGAGCAAATCAGGGCAATGAGC
CAGCACGAAGAAGGTGGAATTTGGCCTTTTGGTGGAGAATCAAAGGGTTCAGTCAACATT
TATAGGCAACGGCCCTCGCAATCCAACCAGTACGGCCAACTCTATGAAGTAGATGGTAGC
CACTATAGGCAGCTAGAAGATCTCGATATTTCCGTCTCTTTCGCCAACATCACTCAGGGT
GGGATGTTGGGCCCAGTTTACAGCTCAAGGGCAACGAAAATAGCAGTGGTGGTTGATGGC
GAAGGTTACTTCGAGATGGCGTGCCCTCACTTGGCTTCTGAGTCGGGTAGCAGAGGACGA
CAAAGCAGAGGAAGCGAAAGGGAAACGAGAATTGGTTCAGGTTATCAGAAGGTGCGGGCA
AGGTTGAGGCGTGGTATGGTGGTGATTATCCCTGCAGGCCATCCAGTTGTGAACGTAGCT
TCAAACAACCAGAACTTGCAACTTGTTTGCTTCAATATCAATGCCCGCAACAATGAAATT
GTCCCTCTTGCAGGGAGGAACAATGTAATGAGTCAATTGGAGAGGGAAGCAATGGAGTTG
GGTTTCGGGGTACCGGCAAGAGAAGTGGAGGAAATATTCAGTAGGAGCCAACAGGAGGAG
TTGTTCTTCCAGGGGCCTGGTGGTCGACAGCAACATCAGGAAGGTGGCCGAGCCGATGCA
TGA

Peptide Sequence

PEP ID

XP_016464014.1
PEP Infomation

PREDICTED: vicilin-like antimicrobial peptides 2-2 [Nicotiana tabacum]
Sequence

MMVKVRPFLFCLLLLAVASLSLGTKDPELKRCKHQCKALQQIGEHQRKECYEMCEKYDSE
KQSKEEDTSTFFPYRGKEETGEEEEGQQYGEQERENPYVFEDQHFITGIKTQHGRIRVLP
KFTERSKLLKGIENYRVAILEANPQTFIVPNHWDADAVLFVAQGRGTLNLVRRGKRNSFN
IRPGDVIRVHAGTTAYLINRENNEKLVIAKLLNPVSTPGQFEHFFGPGGRENPESFYNAF
SSEILESALNVRRDRLQRLFGQQREGVIIRASEEQIRAMSQHEEGGIWPFGGESKGSVNI
YRQRPSQSNQYGQLYEVDGSHYRQLEDLDISVSFANITQGGMLGPVYSSRATKIAVVVDG
EGYFEMACPHLASESGSRGRQSRGSERETRIGSGYQKVRARLRRGMVVIIPAGHPVVNVA
SNNQNLQLVCFNINARNNEIVPLAGRNNVMSQLEREAMELGFGVPAREVEEIFSRSQQEE
LFFQGPGGRQQHQEGGRADA

Transcript Sequence

Gene sequence data has not been registered.